Seckel Syndrome 7; Sckl7

Description

Microcephalic primordial dwarfism, Dauber type is a rare, genetic developmental defect during embryogenesis characterized by severe pre- and postnatal growth retardation, severe microcephaly, severe developmental delay and intelletual disability, severe adult short stature and facial dysmorphism (incl. hypotelorism, small ears, prominent nose). Other reported features include skeletal anomalies (Madelung deformity, clinodactyly, mild lumbar scoliosis, bilateral hip dysplasia) and seizures. Absence of thelarche and menarche is also associated.

Genes related to Seckel Syndrome 7; Sckl7

Clinical Features

Top most frequent phenotypes and symptoms related to Seckel Syndrome 7; Sckl7

Intellectual disability
Seizures
Global developmental delay
Short stature
Microcephaly
Growth delay
Intrauterine growth retardation
Intellectual disability, severe
Delayed skeletal maturation
Obesity

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Incidence and onset information

— Not enough data available about incidence and published cases.

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Seckel Syndrome 7; Sckl7 Recommended genes panels

Panel Name, Specifity and genes Tested/covered
Seckel Syndrome Panel. By Genetic Services Laboratory University of Chicago in United States. CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN Specificity 10 % Genes 100 %
Microcephaly Deletion/Duplication Panel. By Genetic Services Laboratory University of Chicago in United States. UBE3A, SLC25A19, MECP2, SLC9A6, WWOX, CDKL5, FOXG1, SLC2A1, WDR62, NBN, MCPH1, ASPM, ARFGEF2, CENPJ, QARS, NDE1, PQBP1, RAB3GAP1, TSEN54, STIL , (...) View the complete list with 59 more genes Panel GTR000558956 complete gene list UBE3A, SLC25A19, MECP2, SLC9A6, WWOX, CDKL5, FOXG1, SLC2A1, WDR62, NBN, MCPH1, ASPM, ARFGEF2, CENPJ, QARS, NDE1, PQBP1, RAB3GAP1, TSEN54, STIL, SPATA5, DYRK1A, PNKP, TCF4, KIF1BP, ATRX, CASK, ZEB2, DIAPH1, CTNNB1, EIF2S3, TSEN34, TSEN2, CEP152, CDK5RAP2, PCNT, ATR, CENPF, SOX11, RAB3GAP2, STAMBP, KIF11, EFTUD2, RAB18, IER3IP1, RBBP8, NHEJ1, LIG4, TRMT10A, TBC1D20, KATNB1, MED17, CIT, AGMO, SASS6, MFSD2A, CENPE, PHC1, CDK6, ZNF335, CEP135, KNL1, CEP63, TRAPPC9, NIN, ORC1, CDC6, CDT1, ORC6, ORC4, PLK4, CRIPT, PYCR2, TUBGCP4, ASXL3, TUBGCP6, USP18, PPP1R15B, SLC1A4 Specificity 2 % Genes 100 %
Microcephaly and pontocerebellar hypoplasia (NGS panel for 52 genes). By CGC Genetics in Portugal. SLC25A19, DNM1L, RARS2, WDR62, DYNC1H1, VRK1, POMT1, MCPH1, ASPM, MBD5, CENPJ, NDE1, PQBP1, TSEN54, PAFAH1B1, STIL, TUBB2B, DYRK1A, PNKP, OPHN1 , (...) View the complete list with 32 more genes Panel GTR000525192 complete gene list SLC25A19, DNM1L, RARS2, WDR62, DYNC1H1, VRK1, POMT1, MCPH1, ASPM, MBD5, CENPJ, NDE1, PQBP1, TSEN54, PAFAH1B1, STIL, TUBB2B, DYRK1A, PNKP, OPHN1, CASK, EXOSC3, TSEN34, TSEN2, CEP152, CDK5RAP2, PCNT, ATR, CHMP1A, AP4M1, STAMBP, KIF11, EFTUD2, IER3IP1, RBBP8, NHEJ1, LIG4, TUBG1, KIF5C, KIF2A, MED17, ZNF335, CEP135, KNL1, CEP63, NIN, AMPD2, SEPSECS, TUBGCP6, BUB1B, CLP1, VPS53 Specificity 2 % Genes 100 %
Microcephalic primordial dwarfism Comprehensive panel. By Connective Tissue Gene Tests in United States. CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN, CDC45, ORC1, GMNN, CDC6, CDT1, ORC6, ORC4, RNU4ATAC, XRCC4, ATRIP , (...) View the complete list with 1 more genes Panel GTR000559187 complete gene list CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN, CDC45, ORC1, GMNN, CDC6, CDT1, ORC6, ORC4, RNU4ATAC, XRCC4, ATRIP, DONSON Specificity 5 % Genes 100 %
Microcephalic primordial dwarfism Deletion / Duplication panel. By Connective Tissue Gene Tests in United States. CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN, CDC45, ORC1, GMNN, CDC6, CDT1, ORC6, ORC4, RNU4ATAC, XRCC4, ATRIP , (...) View the complete list with 1 more genes Panel GTR000559196 complete gene list CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN, CDC45, ORC1, GMNN, CDC6, CDT1, ORC6, ORC4, RNU4ATAC, XRCC4, ATRIP, DONSON Specificity 5 % Genes 100 %
Microcephalic primordial dwarfism NGS panel. By Connective Tissue Gene Tests in United States. CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN, CDC45, ORC1, GMNN, CDC6, CDT1, ORC6, ORC4, RNU4ATAC, XRCC4, ATRIP , (...) View the complete list with 1 more genes Panel GTR000559251 complete gene list CENPJ, CEP152, PCNT, ATR, DNA2, RBBP8, LIG4, CEP63, TRAIP, NIN, CDC45, ORC1, GMNN, CDC6, CDT1, ORC6, ORC4, RNU4ATAC, XRCC4, ATRIP, DONSON Specificity 5 % Genes 100 %
Seckel Syndrome. By Institute of Human Genetics Cologne University in Germany. CENPJ, CEP152, CDK5RAP2, ATR, DNA2, RBBP8, NIN, ATRIP Specificity 13 % Genes 100 %
Seckel syndrome type 7. By Centogene AG - the Rare Disease Company in Germany. NIN Specificity 100 % Genes 100 %
Microcephaly and Pontocerebellar Hypoplasia Panel. By CeGaT GmbH in Germany. SLC25A19, RARS2, WDR62, DYNC1H1, VRK1, MCPH1, ASPM, MBD5, CENPJ, PQBP1, TSEN54, STIL, DYRK1A, PNKP, CASK, EXOSC3, TSEN34, TSEN2, CEP152, CDK5RAP2 , (...) View the complete list with 16 more genes Panel GTR000522394 complete gene list SLC25A19, RARS2, WDR62, DYNC1H1, VRK1, MCPH1, ASPM, MBD5, CENPJ, PQBP1, TSEN54, STIL, DYRK1A, PNKP, CASK, EXOSC3, TSEN34, TSEN2, CEP152, CDK5RAP2, PCNT, ATR, CHMP1A, STAMBP, RBBP8, TUBG1, KIF5C, KIF2A, MED17, ZNF335, CEP135, KNL1, CEP63, NIN, SEPSECS, BUB1B Specificity 3 % Genes 100 %
Microcephaly and Pontocerebellar Hypoplasia Panel. By CeGaT GmbH in Germany. SLC25A19, RARS2, WDR62, DYNC1H1, VRK1, MCPH1, ASPM, MBD5, CENPJ, PQBP1, TSEN54, STIL, DYRK1A, PNKP, CASK, EXOSC3, TSEN34, TSEN2, CEP152, CDK5RAP2 , (...) View the complete list with 16 more genes Panel GTR000522411 complete gene list SLC25A19, RARS2, WDR62, DYNC1H1, VRK1, MCPH1, ASPM, MBD5, CENPJ, PQBP1, TSEN54, STIL, DYRK1A, PNKP, CASK, EXOSC3, TSEN34, TSEN2, CEP152, CDK5RAP2, PCNT, ATR, CHMP1A, STAMBP, RBBP8, TUBG1, KIF5C, KIF2A, MED17, ZNF335, CEP135, KNL1, CEP63, NIN, SEPSECS, BUB1B Specificity 3 % Genes 100 %
Selected Genetic Syndromes with skeletal involvement Panel. By CeGaT GmbH in Germany. RECQL4, LMX1B, FGFR3, CREBBP, FGFR2, CDKN1C, CENPJ, SALL1, CEP152, PCNT, ATR, GDF6, SH3PXD2B, DNA2, FGF10, SALL4, TBX5, EP300, RBBP8, GDF3 , (...) View the complete list with 22 more genes Panel GTR000527952 complete gene list RECQL4, LMX1B, FGFR3, CREBBP, FGFR2, CDKN1C, CENPJ, SALL1, CEP152, PCNT, ATR, GDF6, SH3PXD2B, DNA2, FGF10, SALL4, TBX5, EP300, RBBP8, GDF3, MGP, ESCO2, TBX15, CCNQ, CUL7, CEP63, NIN, ORC1, CDC6, CDT1, ORC6, ORC4, OBSL1, CCDC8, LARP7, POC1A, FAM111A, TBCE, SF3B4, FGF9, MEOX1, TBX3 Specificity 3 % Genes 100 %
Neurology: Sequencing Panel. By EGL Genetic Diagnostics Eurofins Clinical Diagnostics in United States. UBE3A, ADSL, TUBB3, CC2D2A, TMEM67, NPHP1, ADGRV1, CEP290, SHH, POLG, SLC25A19, MECP2, LIAS, GAMT, GATM, STXBP1, TUBA1A, RARS2, CTSD, SLC25A22 , (...) View the complete list with 144 more genes Panel GTR000512608 complete gene list UBE3A, ADSL, TUBB3, CC2D2A, TMEM67, NPHP1, ADGRV1, CEP290, SHH, POLG, SLC25A19, MECP2, LIAS, GAMT, GATM, STXBP1, TUBA1A, RARS2, CTSD, SLC25A22, SLC9A6, ALDH7A1, MKS1, TPP1, CLN3, ARX, CDKL5, DHCR7, FOXG1, MEF2C, PCDH19, SLC2A1, WDR62, TSC2, TSC1, PTCH1, CLN6, CLN8, FKTN, PPT1, POMGNT1, CLN5, TMEM216, CSTB, SCN1A, AHI1, FKRP, FGF8, VRK1, POMT2, POMT1, CACNB4, LARGE1, MCPH1, ASPM, ATP1A2, CHRNB2, CPA6, EFHC1, LGI1, GOSR2, NHLRC1, KCTD7, PRICKLE1, SCN9A, SLC19A3, ST3GAL5, SCN1B, SCN2A, FOLR1, GRIN2B, KCNT1, KCNQ2, KCNQ3, PNPO, CHRNA2, CHRNA4, EPM2A, GABRA1, GABRG2, GRIN2A, MBD5, KCNMA1, SCARB2, TBC1D24, PRRT2, BCKDK, ARFGEF2, CENPJ, DCX, NDE1, PQBP1, RAB3GAP1, SIX3, RELN, TUBA8, FLNA, TSEN54, PAFAH1B1, ADGRG1, STIL, SRPX2, TUBB2B, DNAJC5, MFSD8, MAGI2, ST3GAL3, SCN8A, NRXN1, PLCB1, SPTAN1, PNKP, KCNJ10, TCF4, CNTNAP2, KIF1BP, ATRX, ARHGEF9, SYN1, OPHN1, ATP6AP2, CASK, ZEB2, ACTB, ACTG1, LAMC3, EHMT1, EXOSC3, TSEN34, TSEN2, TGIF1, ZIC2, CEP152, NODAL, FOXH1, GLI2, CDK5RAP2, PCNT, ATR, CHMP1A, RAB3GAP2, TMEM237, TMEM138, RPGRIP1L, KIF7, CEP41, EOMES, RAB18, RBBP8, MYCN, VLDLR, DISP1, RTTN, ZNF335, CEP135, KNL1, CEP63, NIN, CDC6, CDT1, ORC6, ORC4, POC1A, MAPK10 Specificity 1 % Genes 100 %
NIN. By Fulgent Genetics Fulgent Genetics in United States. NIN Specificity 100 % Genes 100 %
Caris MI TumorSeek 592-Gene NGS Panel. By Caris Life Sciences in United States. BRCA1, BRCA2, VHL, APC, MSH2, PMS2, MSH6, MLH1, MUTYH, PTEN, RECQL4, RUNX1, TP53, FOXL2, HNF1A, PPARG, COL1A1, WT1, RB1, SDHAF2 , (...) View the complete list with 571 more genes Panel GTR000560898 complete gene list BRCA1, BRCA2, VHL, APC, MSH2, PMS2, MSH6, MLH1, MUTYH, PTEN, RECQL4, RUNX1, TP53, FOXL2, HNF1A, PPARG, COL1A1, WT1, RB1, SDHAF2, RET, ELN, CASP8, SDHC, RAF1, FH, IDH2, SDHB, ALDH2, ATIC, AMER1, BCOR, SOX2, NCOA4, SEPT9, STAT3, MEN1, TSHR, FGFR3, AR, FANCC, BLM, BRAF, CREBBP, HRAS, KRAS, MAP2K1, NRAS, PTPN11, FGFR2, MAP2K2, TSC2, RAD21, CBL, TSC1, NSD1, ALK, ATM, MRE11, NBN, PTCH1, PHOX2B, NF2, PALB2, SUFU, CDH1, STK11, CDK4, CDKN2A, SDHD, FLCN, MET, GPC3, CHEK2, MAX, BMPR1A, SMAD4, RAD50, BRIP1, GATA2, PAX5, SBDS, CEBPA, PRF1, PRKAR1A, CDC73, BARD1, PMS1, MPL, WAS, BTK, NDRG1, DNM2, NTRK1, CNBP, NF1, FGFR1, FGF23, PDK1, FUS, TPM3, FGF14, GRIN2A, STIL, KMT2D, SETD2, TBL1XR1, ATRX, PHF6, PAK3, KDM5C, SETBP1, CACNA1D, HGF, ERCC2, ERCC3, PAX3, SOX10, FGF3, GATA3, MYH9, MED12, FOXP1, CTNNB1, KAT6B, GATA1, RPL5, CANT1, RPL10, MTOR, ATR, NOTCH1, TGFBR2, MYH11, DNMT3A, EZH2, MITF, KCNJ5, AKAP9, KDM6A, TFG, CTNNA1, MAF, TERT, NKX2-1, PRDM16, ERBB3, ARID2, SMARCE1, KMT2A, SMARCA4, SMARCB1, ARID1A, NT5C2, FLT4, FGF10, EP300, KIT, ASXL1, JAK3, SH2B3, CALR, GNAS, CREB3L1, SMAD2, FANCA, FANCG, FANCF, FANCE, FANCL, FANCD2, CYP2D6, BAP1, CDKN1B, VEGFA, ERCC4, PIK3CA, MYCN, CSF1R, AKT2, GNAQ, HOXA11, FLT3, NPM1, EGFR, JAK2, ABL1, ZRSR2, U2AF1, TET2, STAG2, SRSF2, SF3B1, PDGFRA, MYD88, IKZF1, IDH1, FBXW7, ETV6, CSF3R, CBLB, BCORL1, CBLC, IL7R, POLE, GNA11, PIK3R2, AKT3, AKT1, EXT2, EXT1, FAS, ITK, STAT5B, PTPRC, BCR, NFKBIA, CIITA, NFKB2, CTLA4, PIK3R1, PRKDC, NOTCH2, POT1, CARD11, AFF4, NTRK2, MNX1, CCND2, HOXA13, MAP3K1, SRC, RUNX1T1, FLI1, MUC1, CDK6, KNL1, EZR, CTCF, NIN, TCF12, WRN, PAX8, DICER1, PDGFRB, PDGFB, ATP2B3, CAMTA1, ERCC5, XPA, RAD51, BUB1B, NSD2, WISP3, HOXD13, CYLD, FLT1, KDR, ZNF384, TNFAIP3, KDSR, KIAA1549, LIFR, TRIP11, CD79A, CD79B, KAT6A, XPC, CCND1, BCL2, CDK12, DDB2, ABL2, IL21R, MALT1, ETV5, IGF1R, MDM2, DDR2, GPHN, RNF213, MAFB, CHN1, PML, DEK, NUMA1, PICALM, HNRNPA2B1, ERBB2, CBFB, ERCC1, RARA, TCF3, PBX1, FIP1L1, ZBTB16, TAL1, AFF3, NUP214, MN1, MLLT3, CLP1, MLLT1, CDKN2B, YWHAE, SMO, BCL6, MYC, BIRC3, RPN1, MECOM, CDKN2C, HOXC13, RNF43, NUP93, PRRX1, CLTCL1, NONO, AXL, BCL11A, TET1, CIC, SLC34A2, CLTC, PPP2R1A, ERBB4, ATP1A1, KDM5A, RALGDS, RICTOR, RAC1, CD74, CCNE1, KEAP1, NFE2L2, ARAF, BRD4, EML4, GNA13, KIF5B, RPTOR, ROS1, MYCL, NTRK3, FGFR4, KMT2C, SS18L1, ESR1, BCL10, IL2, LCK, INHBA, MLF1, CRLF2, ABI1, AXIN1, UBR5, EWSR1, TAF15, RHOH, PAX7, CRKL, PIK3CG, FOXA1, RBM15, CREB1, IRS2, PCM1, HMGA1, IRF4, HMGA2, HIP1, GOLGA5, TCF7L2, GSK3B, GOPC, NCKIPSD, NACA, CDX2, CCNB1IP1, CDH11, MYB, NFIB, CCND3, CDK8, NCOA1, CD274, NCOA2, FUBP1, GAS7, FOXO3, FOXO4, TENT5C, FHIT, ERG, FBXO11, ERC1, FCRL4, FGF6, FEV, ELF4, ECT2L, EPS15, EPHA5, DOT1L, EBF1, EPHA3, EIF4A2, PER1, ELK4, EPHB1, PDCD1LG2, DDX10, PAFAH1B2, DAXX, DDIT3, PBRM1, PDCD1, DDX5, PCSK7, PATZ1, DDX6, PDE4DIP, CNTRL, COPB1, CRTC3, CRTC1, OMD, NUP98, CNOT3, CHIC2, CHEK1, CHCHD7, CARS, NUTM1, MSN, BCL7A, WDCP, MAML2, EMSY, MCL1, MRTFA, BRD3, BCL9, MAP2K4, MLLT10, MDM4, MLLT11, AFDN, LHFPL6, ARHGAP26, ARFRP1, LASP1, LRIG3, ATF1, KTN1, LMO1, AURKB, BCL2L2, ARHGEF12, BCL2L11, ARNT, LPP, LGR5, LCP1, LRP1B, ASPSCR1, KLK2, HSP90AA1, HSP90AB1, IKBKE, JAZF1, IL6ST, KLHL6, HOXA9, HOOK3, JUN, JAK1, HEY1, HIST1H3B, HERPUD1, PRDM1, POU5F1, PIM1, POU2AF1, PRCC, PLAG1, VTI1A, TMPRSS2, USP6, VEGFB, TRIM26, TNFRSF14, TRRAP, TRAF7, TPR, TTL, TNFRSF17, TLX3, TRIM27, ZMYM2, ZNF521, ZNF217, XPO1, WWTR1, TFPT, SEPT5, TFRC, NSD3, THRAP3, ZNF331, SRSF3, TCEA1, SRGAP3, STAT4, SS18, SSX1, SPOP, SOCS1, SNX29, SPEN, SPECC1, TCL1A, SYK, SLC45A3, REL, SH3GL1, SDC4, RPL22, RAD51B, RANBP17, PSIP1, RABEP1, ACKR3, ACSL6, AFF1, ACSL3, ADGRA2, BTG1, ELL, SET, BCL3, ETV1, FOXO1, TFE3, CREB3L2, MSI2, NR4A3, TFEB, ETV4, NUTM2B, BCL11B, KLF4, H3F3A, FGF19, SUZ12, FGF4, P2RY8, TOP1, AURKA, MEF2B, ZNF703, GID4, H3F3B, TRIM33, WIF1, GMPS, SFPQ, LYL1, MDS2, FGFR1OP, RAP1GDS1, FNBP1, LMO2, HOXC11, TAL2, SEPT6, MLLT6, HLF, COX6C, OLIG2, C15orf65, TPM4, RMI2, FSTL3, CBFA2T3, CCDC6, TLX1, HIST1H4I, HOXD11, MTCP1 Specificity 1 % Genes 100 %
SYNDROME DE SECKEL: NGS PANEL. By Laboratorio de Genetica Clinica SL in Spain. CENPJ, CEP152, ATR, DNA2, RBBP8, CEP63, NIN Specificity 15 % Genes 100 %
Primary Autosomal Recessive Microcephalies and Seckel Syndrome Spectrum Disorders: gene sequencing panel. By CEN4GEN Institute for Genomics and Molecular Diagnostics in Canada. WDR62, MCPH1, ASPM, CENPJ, STIL, CEP152, CDK5RAP2, ATR, RBBP8, PHC1, CDK6, CEP135, KNL1, CEP63, NIN, ATRIP Specificity 7 % Genes 100 %

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