Achalasia, Familial Esophageal

Description

Achalasia is a primary motor disorder of the esophagus. It is characterized by aperistalsis and a failure of the lower esophageal sphincter to relax due to a loss of inhibitory nitrinergic neurons in the esophageal myenteric plexus. Patients typically present with dysphagia, regurgitation, retrosternal pain, and substantial weight loss (Farrokhi and Vaezi, 2007; summary by Gockel et al., 2010).

Genes related to Achalasia, Familial Esophageal

NOS1
HLA-DQA1
HLA-DQB1
CRLF1

Clinical Features

Phenotypes and symptoms related to Achalasia, Familial Esophageal

Rheumatoid arthritis
Keratoconjunctivitis sicca
Xerostomia
Achalasia

Incidence and onset information

— Based on the latest data available Achalasia, Familial Esophageal have a estimated incidence of 0.77 per 100k in Europe.

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Achalasia, Familial Esophageal Recommended genes panels

Panel Name, Specifity and genes Tested/covered
NOS1. By Fulgent Genetics Fulgent Genetics in United States. NOS1 Specificity 100 % Genes 25 %
Celiac Disease (HLA-DQ2 and HLA-DQ8) Genotyping. By ARUP Laboratories, Molecular Genetics and Genomics in United States. HLA-DQB1, HLA-DQA1 Specificity 100 % Genes 50 %
Celiac disease (HLA-DQ/DR). By CGC Genetics in Portugal. HLA-DQB1, HLA-DQA1 Specificity 100 % Genes 50 %
Lactose intolerance (MCM6 gene) and Celiac disease (HLA-DQ2/ HLA-DQ8). By CGC Genetics in Portugal. HLA-DQB1, HLA-DQA1, MCM6 Specificity 67 % Genes 50 %
Celiac Disease via Next Generation Sequencing HLA Typing. By PreventionGenetics PreventionGenetics in United States. HLA-DQB1, HLA-DQA1 Specificity 100 % Genes 50 %
HLA DQ2/DQ8. By Furst Medical Laboratories, FurstNAT in Norway. HLA-DQB1, HLA-DQA1 Specificity 100 % Genes 50 %
*Celiac Disease (HLA-DQA105, HLA-DQB102, and HLA-DQB103:02) Genotyping.** By Molecular Genetics Laboratory Genetrack Biolabs Inc. in Canada. HLA-DQB1, HLA-DQA1 Specificity 100 % Genes 50 %
HLA-DQA1. By Fulgent Genetics Fulgent Genetics in United States. HLA-DQA1 Specificity 100 % Genes 25 %
Tempus xT assay. By Tempus Labs, Inc. in United States. BRCA1, BRCA2, MTHFR, VHL, APC, EPCAM, MSH2, PMS2, MSH6, MLH1, MUTYH, PTEN, RECQL4, RUNX1, TP53, ATP7B, FOXL2, HNF1A, WT1, RB1 , (...) View the complete list with 571 more genes Panel GTR000558436 complete gene list BRCA1, BRCA2, MTHFR, VHL, APC, EPCAM, MSH2, PMS2, MSH6, MLH1, MUTYH, PTEN, RECQL4, RUNX1, TP53, ATP7B, FOXL2, HNF1A, WT1, RB1, SDHAF2, HNF1B, RET, MC1R, MTRR, CASP8, CYP1B1, KIF1B, SDHC, RAF1, FH, IDH2, SOD2, SDHB, TUSC3, ATIC, TAP1, AMER1, BCOR, PRKN, SOX2, ZFHX3, TMEM127, STAT3, MEN1, SDHA, TSHR, FGFR3, AR, CFTR, FANCC, BLM, BRAF, CREBBP, HRAS, KRAS, LDLR, MAP2K1, NRAS, PTPN11, FGFR2, RIT1, MAP2K2, TSC2, RAD21, CBL, SMC3, SMC1A, TSC1, NSD1, ALK, ATM, MRE11, NBN, PTCH1, PHOX2B, NF2, PALB2, SUFU, CDH1, STK11, CDK4, CDKN2A, CDKN1C, SDHD, FLCN, MET, GPC3, CHEK2, MAX, BMPR1A, SMAD4, RAD50, BRIP1, GATA2, PAX5, CEBPA, PRKAR1A, CDC73, RAD51C, BARD1, ENG, PMS1, RAD51D, G6PD, UGT1A1, MPL, BTK, DPYD, DNM2, LMNA, NTRK1, NOTCH3, NF1, FGFR1, FGF8, CASR, FGF23, PDK1, FGF14, CHD2, GRIN2A, KMT2D, SETD2, TBL1XR1, ATRX, PHF6, KDM5C, SETBP1, HGF, ERCC2, ERCC3, SOX10, FGF3, GATA3, MED12, FOXP1, ARID1B, CTNNB1, LZTR1, GATA1, RPL5, RASA1, SEC23B, FANCB, DKC1, RBM10, TAF1, SOX9, SPRED1, MTOR, ABCB1, ATR, NOTCH1, SMAD3, TGFBR2, ACTA2, MYH11, DNMT3A, EZH2, MITF, TP63, KDM6A, CTNNA1, MAF, TERT, NKX2-1, TPM1, ERBB3, ERCC6, ARID2, SMARCE1, KMT2A, SMARCA4, SMARCB1, ARID1A, NT5C2, FLT4, FGF10, SPINK1, PRSS1, CTRC, H19, EP300, KIT, ASXL1, JAK3, SH2B3, MGMT, CALR, CTC1, NHP2, NOP10, GNAS, SMAD2, FANCA, FANCG, FANCF, FANCE, SLX4, FANCM, FANCL, FANCI, FANCD2, CYP2D6, XRCC2, BAP1, CDKN1B, VEGFA, ERCC4, RPS15, GATA4, PIK3CA, MYCN, CSF1R, APOB, POLD1, GREM1, AKT2, GATA6, GNAQ, FLT3, NPM1, TPMT, EGFR, JAK2, ABL1, ZRSR2, U2AF1, TET2, STAG2, SRSF2, SF3B1, PDGFRA, MYD88, IKZF1, IDH1, FBXW7, ETV6, CUX1, CSF3R, CBLB, BCORL1, CBLC, CD40, IFNGR1, IFNGR2, IL7R, ABRAXAS1, POLE, AXIN2, GNA11, PIK3R2, AKT3, AKT1, FAS, CXCR4, STAT5B, BCR, PIK3CD, NFKBIA, CIITA, RANBP2, CTLA4, IL10RA, PIK3R1, CD19, MS4A1, NOTCH2, EPOR, TRAF3, TMEM173, POT1, CARD11, NTRK2, IL2RA, CCND2, DYNC2H1, MAP3K1, ASNS, SRC, RUNX1T1, CDK6, CTCF, WRN, EGLN1, UBE2T, PAX8, DICER1, PDGFRB, KMT2B, ERCC5, XPA, RAD51, BUB1B, GALNT12, NSD2, CYLD, FLG, FLT1, KDR, TNFAIP3, LYN, PLCG2, B2M, CD79A, CD79B, FCGR2A, HLA-DQB1, HLA-B, KEL, HLA-DQA1, TYMS, HOXB13, NTHL1, DDX3X, KAT6A, MIB1, XPC, UMPS, FGF9, CCND1, SLC26A3, BCL2, HDAC4, IFNL3, TBX3, CDK12, ARID5B, POLH, MTAP, DIS3L2, DDB2, ABL2, MALT1, MLH3, ETV5, MDM2, DDR2, PALLD, EGF, MAFB, PML, MSH3, ERBB2, CBFB, ERCC1, RARA, TCF3, MLLT3, EPHA2, CDKN2B, CEP57, PTCH2, SMO, BCL6, MYC, BIRC3, CKS1B, CDKN2C, RNF43, RXRA, FAT1, MAD2L2, CD70, AXL, CHD4, CIC, MAP3K7, PPP2R1A, ERBB4, KDM5A, RICTOR, RAC1, GLI1, HLA-DRB1, CCNE1, NRG1, KEAP1, NFE2L2, ARAF, BRD4, GNA13, RPTOR, ROS1, MYCL, NTRK3, FGFR4, KMT2C, ESR1, RINT1, CYP3A5, XRCC3, PRSS2, BCL10, TNF, CRLF2, AXIN1, EWSR1, FCGR3A, TAP2, PAX7, MAPK1, PIK3CB, CRKL, PIK3CG, FOXA1, GSTP1, IRS2, IRF4, IFNAR2, IL6R, IRF1, DIRC2, EPHB2, ZNF750, RNF139, TCF7L2, RAD54L, PTPN22, GRM3, GPS2, CBR3, MYB, NQO1, CD22, CDKN1A, CCND3, CDK8, NCOR1, CD274, FUBP1, FOXO3, FRS2, FNTB, GEN1, FGF2, ETS1, FGF5, FDPS, TENT5C, FHIT, ERG, FGF1, FGF7, ETS2, FBXO11, ERRFI1, FGF6, EPHA7, ELF3, ECT2L, DOT1L, EBF1, EPHB1, PDCD1LG2, DAXX, PBRM1, PDCD1, PCBP1, DIS3, PAK1, NUP98, NUDT15, CHEK1, VSIR, MKI67, BCL7A, EMSY, BCLAF1, MCL1, C3orf70, MAP2K4, MDM4, C11orf65, ARHGAP26, LMO1, AURKB, ARHGAP35, BCL2L11, LEF1, LRP1B, ITPKB, HSP90AA1, IL15, INPP4B, ING1, IKBKE, IRF2, KLHL6, IFIT1, KLLN, JUN, IFIT3, JAK1, IDO1, IFNAR1, IFIT2, AJUBA, HSPH1, HLA-F, HLA-DRA, HIF1A, HDAC2, HIST1H4E, HAVCR2, HIST1H1E, HLA-DPA1, HLA-DPB1, HLA-E, HLA-DOA, HDAC1, HLA-DMB, HLA-DMA, HLA-DOB, HAS3, HLA-DQA2, HLA-DQB2, PIAS4, PRDM1, PIM1, PPP1R15A, PREX2, PPP2R2A, PIK3C2B, PRCC, TMPRSS2, UGT1A9, TOP2A, TNFRSF9, TNFRSF14, TNFRSF17, ZNF217, XPO1, TIGIT, XRCC1, ZNF620, ZNF471, STAT4, TANC1, SPOP, STAT5A, SOCS1, SLIT2, SPEN, TCL1A, SYK, STAT6, SLC47A2, RSF1, SCG5, SGK1, RPS6KB1, PTPN13, RAD51B, QKI, PTPRD, ABCC3, ACVR1B, BTG1, ETV1, FOXO1, ETV4, HLA-A, BCL11B, H3F3A, BCL2L1, RHOA, NCOR2, SUZ12, SMARCA1, FGF4, P2RY8, TOP1, AURKA, MEF2B, CCDC6, LAG3, HLA-G, PDPK1, SEMA3C, C8orf34, POU2F2, YEATS4, WEE1, TBC1D12, FOXQ1, ZNRF3, PPP6C, HLA-C, HLA-DRB5 Specificity 1 % Genes 50 %
Narcolepsy (HLA-DQB1 06:02) Genotyping. By ARUP Laboratories, Molecular Genetics and Genomics in United States. HLA-DQB1 Specificity 100 % Genes 25 %
Narcolepsy Risk Factor. By Bioscientia GmbH Center for Human Genetics in Germany. HLA-DQB1, HLA-DRB1 Specificity 50 % Genes 25 %
CRLF1-Related Cold-Induced Sweating Syndrome including Crisponi Syndrome. By Bioscientia GmbH Center for Human Genetics in Germany. CRLF1 Specificity 100 % Genes 25 %
Cold-Induced sweating syndrome including Crisponi syndrome: CRLF1 gene sequence analysis. By GENETAQ Molecular Genetics Centre and Diagnosis of Rare Diseases in Spain. CRLF1 Specificity 100 % Genes 25 %
CRLF1. By Fulgent Genetics Fulgent Genetics in United States. CRLF1 Specificity 100 % Genes 25 %
CRISPONI SYNDROME. By Laboratorio de Genetica Clinica SL in Spain. CRLF1, CLCF1 Specificity 50 % Genes 25 %
COLD INDUCED SWEATING SYNDROME. By Laboratorio de Genetica Clinica SL in Spain. CRLF1, CLCF1 Specificity 50 % Genes 25 %
Induced Sweating by Cold Syndrome including Crisponi Syndrome , Sequencing CRLF1 Gene. By Reference Laboratory Genetics in Spain. CRLF1 Specificity 100 % Genes 25 %

Alternate names

Achalasia, Familial Esophageal Is also known as ;achalasia cardia; idiopathic achalasia of esophagus; primary achalasia.

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