Spondylocostal Dysostosis 1, Autosomal Recessive; Scdo1

Description

The spondylocostal dysostoses are a heterogeneous group of axial skeletal disorders characterized by multiple segmentation defects of the vertebrae (SDV), malalignment of the ribs with variable points of intercostal fusion, and often a reduction in rib number. The term 'spondylocostal dysostosis' is best applied to those phenotypes with generalized SDV and a broadly symmetric thoracic cage (summary by Gucev et al., 2010). Genetic Heterogeneity of Spondylocostal DysostosisOther forms of SCDO include SCDO2 (OMIM ), caused by mutation in the MESP2 gene (OMIM ) on chromosome 15q26; SCDO3 (OMIM ), caused by mutation in the LFNG gene (OMIM ) on chromosome 7p22; SCDO4 (OMIM ), caused by mutation in the HES7 gene (OMIM ) on chromosome 17p13; SCDO5 (OMIM ), caused by mutation in the TBX6 gene (OMIM ) on chromosome 16p11; and SCDO6 (OMIM ), caused by mutation in the RIPPLY2 gene (OMIM ) on chromosome 6q14.

Clinical Features

Top most frequent phenotypes and symptoms related to Spondylocostal Dysostosis 1, Autosomal Recessive; Scdo1

  • Intellectual disability
  • Short stature
  • Pica
  • Microcephaly
  • Scoliosis
  • Cleft palate
  • Cryptorchidism
  • Milia
  • Depressed nasal bridge
  • Intrauterine growth retardation
And another 51 symptoms. If you need more information about this disease we can help you.
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Incidence and onset information

Not enough data available about incidence and published cases.


Mendelian

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Spondylocostal Dysostosis 1, Autosomal Recessive; Scdo1 Recommended genes panels

Panel Name, Specifity and genes Tested/covered
Klippel-Feil syndrome (NGS panel for 5 genes).

By CGC Genetics in Portugal.

GDF6, GDF3, MEOX1, RIPPLY2, MYO18B
Specificity
20 %
Genes
20 %
Spondylocostal dysostosis (NGS panel of 6 genes).

By CGC Genetics in Portugal.

MESP2, HES7, LFNG, DLL3, RIPPLY2, TBX6
Specificity
84 %
Genes
100 %
Spondylocostal dysostosis (NGS panel of 6 genes).

By CGC Genetics in Portugal.

MESP2, HES7, LFNG, DLL3, RIPPLY2, TBX6
Specificity
84 %
Genes
100 %
Klippel-Feil syndrome (NGS panel for 5 genes).

By CGC Genetics in Portugal.

GDF6, GDF3, MEOX1, RIPPLY2, MYO18B
Specificity
20 %
Genes
20 %
Spondylocostal dysostosis Deletion / Duplication panel.

By Connective Tissue Gene Tests in United States.

MESP2, HES7, LFNG, DLL3, RIPPLY2, TBX6
Specificity
84 %
Genes
100 %
Spondylocostal dysostosis Comprehensive panel.

By Connective Tissue Gene Tests in United States.

MESP2, HES7, LFNG, DLL3, RIPPLY2, TBX6
Specificity
84 %
Genes
100 %
Spondylocostal dysostosis NGS panel.

By Connective Tissue Gene Tests in United States.

MESP2, HES7, LFNG, DLL3, RIPPLY2, TBX6
Specificity
84 %
Genes
100 %
Klippel-Feil syndrome Comprehensive panel.

By Connective Tissue Gene Tests in United States.

GDF6, GDF3, MEOX1, RIPPLY2, MYO18B
Specificity
20 %
Genes
20 %
Klippel-Feil syndrome NGS panel.

By Connective Tissue Gene Tests in United States.

GDF6, GDF3, MEOX1, RIPPLY2, MYO18B
Specificity
20 %
Genes
20 %
Klippel-Feil syndrome Deletion / Duplication panel.

By Connective Tissue Gene Tests in United States.

GDF6, GDF3, MEOX1, RIPPLY2, MYO18B
Specificity
20 %
Genes
20 %
MESP2 - Jarcho-Levin.

By Centre of Molecular Diseases (CMM) CHUV in Switzerland.

MESP2
Specificity
100 %
Genes
20 %
MESP2 - Spondylocostal dysostosis 2.

By Centre of Molecular Diseases (CMM) CHUV in Switzerland.

MESP2
Specificity
100 %
Genes
20 %
MESP2. Complete sequencing.

By Instituto de Medicina Genomica Instituto de Medicina Genomica in Spain.

MESP2
Specificity
100 %
Genes
20 %
HES7, MESP2, LFNG, DLL3. NextGeneDx. Complete sequencing by NGS.

By Instituto de Medicina Genomica Instituto de Medicina Genomica in Spain.

MESP2, HES7, LFNG, DLL3
Specificity
100 %
Genes
80 %
Spondylocostal dysostosis type 2 AR (sequence analysis of MESP2 gene).

By CGC Genetics in Portugal.

MESP2
Specificity
100 %
Genes
20 %
MESP2-Related Spondylocostal Dysostosis, Autosomal Recessive.

By Exeter Molecular Genetics Laboratory in United Kingdom.

MESP2
Specificity
100 %
Genes
20 %
Spondylocostal Dysostosis and Spondylothoracic Dysostosis via MESP2 Gene Sequencing with CNV Detection.

By PreventionGenetics PreventionGenetics in United States.

MESP2
Specificity
100 %
Genes
20 %
Spondylocostal Dysostosis Sequencing Panel with CNV Detection.

By PreventionGenetics PreventionGenetics in United States.

MESP2, HES7, LFNG, DLL3, TBX6
Specificity
80 %
Genes
80 %
Skeletal Disorders and Joint Problems Sequencing Panel with CNV Detection.

By PreventionGenetics PreventionGenetics in United States.

RECQL4, ALPL, ANKH, TYROBP, FKBP10, B4GALT7, IFITM5, LRP5, COL2A1, COL1A1, COL1A2, COL3A1, SOST, TGFB1, LEMD3, TNFRSF11A, CLCN7, SHH, FBN1, DHODH , (...)

View the complete list with 238 more genes
Specificity
2 %
Genes
80 %
Spondylocostal dysostosis, autosomal recessive type II.

By Centogene AG - the Rare Disease Company in Germany.

MESP2
Specificity
100 %
Genes
20 %
Congenital disorder of O-linked glycosylation (CDG).

By GENETAQ Molecular Genetics Centre and Diagnosis of Rare Diseases in Spain.

B4GALT7, KRT5, FKTN, POMGNT1, FKRP, FGF23, POMT2, POMT1, ISPD, B4GAT1, POMGNT2, LARGE1, COL4A1, CHSY1, CHST14, B3GAT3, B3GALT6, B3GLCT, EXT2, EXT1 , (...)

View the complete list with 9 more genes
Specificity
14 %
Genes
80 %
Spondylocostal dysostosis, autosomal recessive.

By GENETAQ Molecular Genetics Centre and Diagnosis of Rare Diseases in Spain.

MESP2, HES7, LFNG, DLL3
Specificity
100 %
Genes
80 %
Disproportionate Short Stature: Sequencing Panel.

By EGL Genetic Diagnostics Eurofins Clinical Diagnostics in United States.

ANKH, COL2A1, COL1A1, FBN1, SLC39A13, AGPS, CTSK, FAM20C, FGFR3, COL10A1, PTPN11, RUNX2, FGFR2, CDKN1C, PRKAR1A, SLC26A2, TRPV4, FGFR1, SHOX, ANO5 , (...)

View the complete list with 65 more genes
Specificity
5 %
Genes
80 %
Spondylocostal Dysostosis NGS Panel.

By Fulgent Genetics Fulgent Genetics in United States.

MESP2, LFNG, DLL3
Specificity
100 %
Genes
60 %
MESP2.

By Fulgent Genetics Fulgent Genetics in United States.

MESP2
Specificity
100 %
Genes
20 %
Comprehensive Skeletal Dysplasias and Disorders Panel.

By Blueprint Genetics in Finland.

RECQL4, ALPL, ANKH, TYROBP, FKBP10, B4GALT7, LRP5, COL2A1, COL1A1, COL1A2, SOST, TGFB1, LEMD3, TNFRSF11A, PYCR1, CLCN7, ATP6V0A2, FBN1, SERPINF1, SP7 , (...)

View the complete list with 226 more genes
Specificity
1 %
Genes
40 %
Comprehensive Growth Disorders / Skeletal Dysplasias and Disorders Panel.

By Blueprint Genetics in Finland.

RECQL4, ALPL, ANKH, TYROBP, FKBP10, B4GALT7, BCS1L, IFITM5, LRP5, COL2A1, COL1A1, COL1A2, COL3A1, SOST, TGFB1, LEMD3, TNFRSF11A, PYCR1, CLCN7, ATP6V0A2 , (...)

View the complete list with 288 more genes
Specificity
1 %
Genes
40 %
Autosomal recessive spondylocostal dysostosis type 2.

By Bioarray in Spain.

MESP2
Specificity
100 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 2.

By Bioarray in Spain.

MESP2
Specificity
100 %
Genes
20 %
SPONDYLOCOSTAL DYSOSTOSIS (SYNDROME DE JARCHO-LEVIN).

By Laboratorio de Genetica Clinica SL in Spain.

MESP2, HES7, LFNG, DLL3
Specificity
100 %
Genes
80 %
Autosomal Recessive Spondylocostal Dysostosis Type 2 , Sequencing MESP2 Gene.

By Reference Laboratory Genetics in Spain.

MESP2
Specificity
100 %
Genes
20 %
Spondylocostal Dysostosis , Panel Massive Sequencing (NGS) 5 Genes.

By Reference Laboratory Genetics in Spain.

MESP2, HES7, LFNG, DLL3, TBX6
Specificity
80 %
Genes
80 %
Spondylocostal Dysostosis, Autosomal Recessive: gene sequencing panel.

By CEN4GEN Institute for Genomics and Molecular Diagnostics in Canada.

MESP2, HES7, LFNG, DLL3
Specificity
100 %
Genes
80 %
LFNG - Spondylocostal dysostosis 3.

By Centre of Molecular Diseases (CMM) CHUV in Switzerland.

LFNG
Specificity
100 %
Genes
20 %
LFNG. Complete sequencing.

By Instituto de Medicina Genomica Instituto de Medicina Genomica in Spain.

LFNG
Specificity
100 %
Genes
20 %
Spondylocostal dysostosis type 3 AR (sequence analysis of LFNG gene).

By CGC Genetics in Portugal.

LFNG
Specificity
100 %
Genes
20 %
LFNG-Related Spondylocostal Dysostosis, Autosomal Recessive.

By Exeter Molecular Genetics Laboratory in United Kingdom.

LFNG
Specificity
100 %
Genes
20 %
Spondylocostal Dysostosis via the LFNG Gene.

By PreventionGenetics PreventionGenetics in United States.

LFNG
Specificity
100 %
Genes
20 %
Spondylocostal dysostosis, autosomal recessive type III.

By Centogene AG - the Rare Disease Company in Germany.

LFNG
Specificity
100 %
Genes
20 %
Congenital Disorders of Glycosylation: Sequencing Panel.

By EGL Genetic Diagnostics Eurofins Clinical Diagnostics in United States.

B4GALT7, ATP6V0A2, SRD5A3, GNE, DDOST, DHDDS, DPM3, PGM1, RFT1, COG1, COG8, TUSC3, MPDU1, DPM1, COG7, ALG9, ALG1, ALG8, ALG12, B4GALT1 , (...)

View the complete list with 46 more genes
Specificity
2 %
Genes
20 %
Congenital Disorders of Glycosylation: Deletion/Duplication Panel.

By EGL Genetic Diagnostics Eurofins Clinical Diagnostics in United States.

B4GALT7, ATP6V0A2, SRD5A3, GNE, DDOST, DHDDS, DPM3, PGM1, RFT1, COG1, COG8, TUSC3, MPDU1, DPM1, COG7, ALG9, ALG8, ALG12, B4GALT1, SLC35A1 , (...)

View the complete list with 45 more genes
Specificity
2 %
Genes
20 %
LFNG.

By Fulgent Genetics Fulgent Genetics in United States.

LFNG
Specificity
100 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 3.

By Bioarray in Spain.

LFNG
Specificity
100 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 3.

By Bioarray in Spain.

LFNG
Specificity
100 %
Genes
20 %
Autosomal Recessive Spondylocostal Dysostosis Type 3 , Sequencing LFNG Gene.

By Reference Laboratory Genetics in Spain.

LFNG
Specificity
100 %
Genes
20 %
HES7 - Spondylocostal dysostosis 4, autosomal recessive.

By Centre of Molecular Diseases (CMM) CHUV in Switzerland.

HES7
Specificity
100 %
Genes
20 %
HES7. Complete sequencing.

By Instituto de Medicina Genomica Instituto de Medicina Genomica in Spain.

HES7
Specificity
100 %
Genes
20 %
Spondylocostal dysostosis 4, AR (sequence analysis of HES7 gene).

By CGC Genetics in Portugal.

HES7
Specificity
100 %
Genes
20 %
HES7-Related Spondylocostal Dysostosis, Autosomal Recessive.

By Exeter Molecular Genetics Laboratory in United Kingdom.

HES7
Specificity
100 %
Genes
20 %
Spondylocostal Dysostosis via HES7 Gene Sequencing with CNV Detection.

By PreventionGenetics PreventionGenetics in United States.

HES7
Specificity
100 %
Genes
20 %
HES7.

By Fulgent Genetics Fulgent Genetics in United States.

HES7
Specificity
100 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 4.

By Bioarray in Spain.

HES7
Specificity
100 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 4.

By Bioarray in Spain.

HES7
Specificity
100 %
Genes
20 %
Autosomal Recessive Spondylocostal Dysostosis Type 4 , Sequencing HES7 Gene.

By Reference Laboratory Genetics in Spain.

HES7
Specificity
100 %
Genes
20 %
DLL3-Related Spondylocostal Dysostosis, Autosomal Recessive.

By Centre of Molecular Diseases (CMM) CHUV in Switzerland.

DLL3
Specificity
100 %
Genes
20 %
Skeletal Dysplasia Panel, Sequencing (39 Genes) and Deletion/Duplication (36 Genes).

By ARUP Laboratories, Molecular Genetics and Genomics in United States.

ALPL, FKBP10, COL2A1, COL1A1, COL1A2, P3H1, CRTAP, AGPS, PPIB, FGFR3, RUNX2, FGFR2, PEX7, SLC26A2, TRPV4, FGFR1, HSPG2, FLNA, LBR, WDR35 , (...)

View the complete list with 19 more genes
Specificity
3 %
Genes
20 %
Skeletal Dysplasia Panel, Sequencing (39 Genes) and Deletion/Duplication (36 Genes), Fetal.

By ARUP Laboratories, Molecular Genetics and Genomics in United States.

ALPL, FKBP10, COL2A1, COL1A1, COL1A2, P3H1, CRTAP, AGPS, PPIB, FGFR3, RUNX2, FGFR2, PEX7, SLC26A2, TRPV4, FGFR1, HSPG2, FLNA, LBR, WDR35 , (...)

View the complete list with 19 more genes
Specificity
3 %
Genes
20 %
DLL3. Complete sequencing.

By Instituto de Medicina Genomica Instituto de Medicina Genomica in Spain.

DLL3
Specificity
100 %
Genes
20 %
Spondylocostal dysostosis type 1, AR (sequence analysis of DLL3 gene).

By CGC Genetics in Portugal.

DLL3
Specificity
100 %
Genes
20 %
DLL3-Related Spondylocostal Dysostosis, Autosomal Recessive.

By Exeter Molecular Genetics Laboratory in United Kingdom.

DLL3
Specificity
100 %
Genes
20 %
Spondylocostal Dysostosis via DLL3 Gene Sequencing with CNV Detection.

By PreventionGenetics PreventionGenetics in United States.

DLL3
Specificity
100 %
Genes
20 %
Spondylocostal dysostosis, autosomal recessive type 1.

By Centogene AG - the Rare Disease Company in Germany.

DLL3
Specificity
100 %
Genes
20 %
Potentially lethal skeletal disorders Panel.

By CeGaT GmbH in Germany.

ALPL, COL2A1, COL1A1, COL1A2, P3H1, CRTAP, AGPS, FAM20C, PPIB, FGFR3, DHCR7, FGFR2, PEX7, SLC26A2, TRPV4, FLNA, OFD1, LBR, COL11A1, COL11A2 , (...)

View the complete list with 24 more genes
Specificity
3 %
Genes
20 %
Spondylocostal dysostosis type 1, autosomal recessive: DLL3 gene sequence analysis.

By GENETAQ Molecular Genetics Centre and Diagnosis of Rare Diseases in Spain.

DLL3
Specificity
100 %
Genes
20 %
DLL3.

By Fulgent Genetics Fulgent Genetics in United States.

DLL3
Specificity
100 %
Genes
20 %
Facial Dysostosis and Related Disorders Panel.

By Blueprint Genetics in Finland.

ALPL, DHODH, CREBBP, HDAC8, SMC3, SMC1A, NIPBL, HSPG2, POLR1C, TCOF1, POLR1D, EHMT1, UBE2A, TWIST1, ALX4, EP300, EFNB1, EFTUD2, EVC, EVC2 , (...)

View the complete list with 6 more genes
Specificity
4 %
Genes
20 %
Skeletal Dysplasias Core Panel.

By Blueprint Genetics in Finland.

ALPL, ANKH, FKBP10, LRP5, COL2A1, COL1A1, COL1A2, TGFB1, TNFRSF11A, CLCN7, SERPINF1, SLC39A13, P3H1, CRTAP, PLOD2, AGPS, CTSK, CYP27B1, FAM20C, CA2 , (...)

View the complete list with 91 more genes
Specificity
1 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 1.

By Bioarray in Spain.

DLL3
Specificity
100 %
Genes
20 %
Autosomal recessive spondylocostal dysostosis type 1.

By Bioarray in Spain.

DLL3
Specificity
100 %
Genes
20 %
Autosomal Recessive Spondylocostal Dysostosis Type 1, Sequencing DLL3 Gene.

By Reference Laboratory Genetics in Spain.

DLL3
Specificity
100 %
Genes
20 %

Alternate names

Spondylocostal Dysostosis 1, Autosomal Recessive; Scdo1 Is also known as vertebral anomalies, jarcho-levin syndrome, spondylothoracic dysplasia, costovertebral dysplasia, spondylothoracic dysostosis;jarcho-levin syndrome.


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